ECMDB

Identification

Name:

RNA polymerase sigma factor FliA

Synonyms:

Not Available

Gene Name:

fliA

Enzyme Class:

Not Available

Biological Properties

General Function:

transcription initiation from bacterial-type RNA polymerase promoter

Specific Function:

Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes.

Cellular Location:

Not Available

SMPDB Pathways:

Not Available

KEGG Pathways:

Two-component system ec02020

Metabolites:

ECMDB ID	Name	View

GO Classification:

Function
cytoplasm
DNA binding
DNA-directed RNA polymerase activity
sequence-specific DNA binding transcription factor activity
sigma factor activity
sporulation resulting in formation of a cellular spore
transcription initiation from bacterial-type RNA polymerase promoter

Gene Properties

Blattner:

Not Available

Gene Orientation

Not Available

Centisome Percentage:

Not Available

Left Sequence End

Not Available

Right Sequence End

Not Available

Gene Sequence:

>720
gtgaattcactctataccgctgaaggtgtaatggataaacactcgctgtggcagcgttat
gtcccgctggtgcgtcacgaagcattgcgcctgcaggttcgactgcccgcgagcgtggaa
cttgacgatctgctacaggcgggcggcattgggttacttaatgccgtcgaacgctatgac
gccctacaaggaacggcatttacaacttacgcagtgcagcgtatccgtggcgctatgctg
gatgaacttcgcagccgtgactgggtgccgcgcagcgtgcgacgcaacgcgcgtgaagtg
gcacaggcaatagggcaactggagcaggaacttggccgcaacgccacggaaactgaggta
gcggaacgtttagggatcgatattgccgattatcgccaaatgttgctcgacaccaataac
agccagctcttctcctacgatgagtggcgcgaagagcacggcgatagcatcgaactggtt
actgatgatcatcagcgagaaaacccgctacaacaactactggacagtaatctgcgccag
cgggtgatggaagccatcgaaacgttgccggagcgcgaaaaactggtattaaccctctat
taccaggaagagctgaatctcaaagagattggcgcggtgctggaggtcggggaatcgcgg
gtcagtcagttacacagccaggctattaaacggttacgcactaaactgggtaagttataa

Protein Properties

Pfam Domain Function:

Not Available

Protein Residues:

239

Protein Molecular Weight:

27520

Protein Theoretical pI:

Not Available

Signaling Regions:

Not Available

Transmembrane Regions:

Not Available

Protein Sequence:

>RNA polymerase sigma factor FliA
MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEV
AERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQ
RVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL

References

External Links:

Resource	Link
Uniprot ID:	P0AEM6
Uniprot Name:	FLIA_ECOLI
CCDB:	FLIA_ECOLI

General Reference:

Not Available

RNA polymerase sigma factor FliA (P0AEM6)