Identification |
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Name: | Putative prophage CP4-6 integrase |
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Synonyms: | Not Available |
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Gene Name: | intF |
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Enzyme Class: | Not Available |
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Biological Properties |
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General Function: | viral entry into host cell |
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Specific Function: | Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome. |
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Cellular Location: | Not Available |
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SMPDB Pathways: | Not Available |
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KEGG Pathways: | Not Available |
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Metabolites: | |
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GO Classification: | Function |
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DNA binding | DNA integration | DNA recombination | establishment of integrated proviral latency | viral entry into host cell |
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Gene Properties |
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Blattner: | Not Available |
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Gene Orientation | Not Available |
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Centisome Percentage: | Not Available |
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Left Sequence End | Not Available |
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Right Sequence End | Not Available |
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Gene Sequence: | >1401
atgtttattccctccatttacttacaccagcagttacattattgtaagacagcaattctc
aactggagccgaaaaatggcgctttcaagacaaaaatttaccttcgaaagacttcgcaga
ttcaccttaccggaagggaaaaaacaaacttttctttgggatgcagatgtaacaaccctg
gcatgccgagcaactagcggagcaaaagcctttgtattccaaagcgtatatgcggggaaa
acccttcgcatgactattggcaacattaacgactggaagattgatgatgcgagagccgag
gcaagacggttacaaacattgatcgatacagggatagatccacgaattgctaaggctgta
aaaatcgcagaagcagaatccctgcaggcagaatcacgtaaaacaaaagtgactttctcc
gtcgcctgggaagactatcttcaagaattgagaaccggtatcagtgcaaaaactaaacgc
ccatattctactcgatacattgccgatcacattaacttgtccagtcgtggaggcgaaagt
aaaaaaagaggccaaggcccgacttcggctggaccattggctagtttgctcaacctgccg
ttatcggagctaaccccagattacatagcagcgtggctgagtacagaaaggcaaaataga
cctaccgtcactgctcacgcttatcgcctactacgtgctttcatcaaatggagtaattat
cagaaaaaatatcaagggatcattcctggcgatctggcacaagattacaacgtaagaaaa
atggttcccgtgtcagcgagtaaagctgatgattgcctgcaaaaggaacaactaaaaagc
tggtttagtgccgtgcgtagcctcaataatcctattgcatcggcctatctccaagtactt
ttgctcactggtgctcggcgtgaagaaattgcgtcgcttcgctggtcagacgtagatttc
aaatggtcaagcatgcgaattaaagacaagatcgaaggtgaacgtatcatccctctcact
ccttatgtttctgaattgttaaatgtactagcgcaatccccaaattctgacgtaaataag
gagggttgggttttcagaagtaacagtaaaagtggcaaaattattgagccgcgttcagcg
cacaacagagcattagtgctggctgagttaccacatatcagccttcacggtttacgtcgt
agttttggtactttggccgagtgggttgaagttcccactggtattgttgctcaaattatg
ggacacaaacccagcgctcttgccgaaaaacactatcgccgtcgtccgttagatctgtta
cgaaaatggcacgagaaaattgagacatggatcttaaatgaagcaggtattaccataaaa
aacaacgttgatatgcgttga |
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Protein Properties |
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Pfam Domain Function: | Not Available |
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Protein Residues: | 466 |
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Protein Molecular Weight: | 53073 |
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Protein Theoretical pI: | Not Available |
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Signaling Regions: | Not Available |
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Transmembrane Regions: | Not Available |
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Protein Sequence: | >Putative prophage CP4-6 integrase
MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTL
ACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAV
KIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGES
KKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNY
QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVL
LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNK
EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM
GHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR |
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References |
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External Links: | |
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General Reference: | Not Available |
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